setup.py

import setuptools
import sys

if sys.version_info[:2] < (3, 8):
    raise RuntimeError("Python version >= 3.8 required.")

def readme():
    with open("README.md", "r") as fh:
        return fh.read()

setuptools.setup(
    name="mutagenesis_visualization",
    version="0.0.2",
    author="Frank Hidalgo",
    author_email="fhidalgoruiz@berkeley.edu",
    description="A package for processing, analysis and visualization of site-saturation mutagenesis data",
    long_description=readme(),
    url="https://github.com/fhidalgor/mutagenesis_visualization",
    keywords=['saturation','mutagenesis','deepsequencing', 'ras', 'site-saturation', 'nextgenseq', 'NGS'],
    packages=setuptools.find_packages(),
    #py_modules=['main.mutagenesis_visualization'],
    classifiers=[
        "Programming Language :: Python :: 3",
        'License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)',
        'Operating System :: OS Independent',
        'Intended Audience :: Science/Research',
        'Topic :: Scientific/Engineering :: Bio-Informatics'],
    project_urls={
        'Documentation': ('https://mutagenesis-visualization.readthedocs.io/'),
        # 'Methods Paper': 'PAPER URL HERE!',
        'Source': 'https://github.com/fhidalgor/mutagenesis_visualization',},
    install_requires=['numpy>=1.18.5', 'seaborn>=0.10.1', 'pandas>=1.0.5', 'scipy>=1.5.0', 'matplotlib>=3.2',
        'scikit-learn>=0.23.1', 'adjustText>=0.7.3', 'biopython>=1.77', 'logomaker>=0.8','freesasa>=2.1.0', 'plotly>=4.11.0'
        'statsmodels>=0.11.1', 'xlsxwriter>=1.2.9', 'xlrd>=1.2.0'],
    dependency_links=['https://github.com/cxhernandez/ipymol/tarball/master'],
    zip_safe=True,
    include_package_data=True,
    python_requires='>=3.8',
    )